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10 Steps to Setting Up a Payroll System Obtain an Employer Identification Number (EIN) Check whether you need state/local IDs. Independent contractor or employee. Take care of employee paperwork. Decide on a pay period. Carefully document your employee compensation terms. Choosing a payroll system. Running payroll.
Contact the Office of Payroll Administration. Call 311 or 212-NEW-YORK (212-639-9675) for help.
How do I register for payroll tax in NY? Apply for a Federal Employer Identification Number (FEIN): Obtain the FEIN through the IRS. Register with the New York State Department of Labor: Create an online profile, submit Form NYS-100 (or NYS-100N for nonprofits), and obtain your Unemployment Insurance (UI) tax rate.
NYC-200V - Payment Voucher for Tax Returns and Extensions.
All U.S. employers must properly complete Form I-9 for every individual they hire for employment in the United States. This includes citizens and noncitizens. Both employees and employers (or authorized representatives of the employer) must complete the form.
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Register for an Employer Payroll Tax Account Number Create a username and password. Go to e-Services for Business. Select Enroll. Enter the required information and select Next. Log in to e-Services for Business. Select New Customer. Select Register for Employer Payroll Tax Account Number.
Employers paying wages or other payments subject to New York State withholding must file a return and pay the New York State, New York City, and Yonkers taxes required to be withheld. You must electronically file and pay your withholding tax returns.

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