Paraffin Embedded Tissue Request Form - UNMC 2025

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The instrument used to cut sections is the microtome. This has an advancing mechanism which moves the object, the paraffin block, for a predetermined distance until it is in contact with the cutting tool, the knife or blade.
Paraffin section cutting involves the use of extremely sharp knives or blades to cut very thin sections of tissue ready for mounting onto glass slides, prior to staining. Once the slides are stained, they will be examined microscopically.
Clamp the paraffin-embedded specimen on a rotary microtome and place the blade in a blade holder. Turn the handwheel and section the specimen. Transfer the paraffin sectioned ribbon to the 38.5 C warm water bath. Pick up the sections onto the microscope slide from the water surface after unfolding.
Abstract. Paraffin embedding is a standard technique used in clinical and research laboratories to create a formalin-fixed, paraffin-embedded (FFPE) block of tissue. Formalin-fixed tissue undergoes tissue processing and then is embedded in paraffin (wax) to create a FFPE block or paraffin block.
Paraffin sectioning is the procedure of cutting thin slices of tissue that has been dehydrated and infiltrated with wax using specialized equipment. This tissue is then embedded in wax before being cut on a microtome.
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To extract DNA from paraffin-embedded samples, tissue cores or microdissected tissue are subjected to xylene treatment, which dissolves the paraffin from the tissue, and then rehydrated using a series of ethanol washes. Proteins and harmful enzymes such as nucleases are subsequently digested by proteinase K.
Paraffin embedding protocol Harvest tissue from animal, place into cassette and submerge in 10% neutral buffered formalin for 24-48 hrs (depending on thickness of sample). Move cassettes into 70% ethanol for 24 hrs. Turn on wax pots. Move cassettes into 75% ethanol for 30 minutes.

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