Fix motif in LOG

Fix motif in LOG efficiently and securely

DocHub makes it quick and straightforward to fix motif in LOG. No need to instal any software – simply add your LOG to your profile, use the easy drag-and-drop editor, and quickly make edits. You can even use your PC or mobile device to adjust your document online from anywhere. That's not all; DocHub is more than just an editor. It's an all-in-one document management solution with form building, eSignature features, and the ability to enable others fill in and sign documents.

How to fix motif in LOG using DocHub:

Upload your LOG to your profile by clicking the New Document and choosing how you want to add your LOG file.
Open your file in our editor.
Make your desired alterations using drag and drop tools.
Once completed, click Download/Export and save your LOG to your device or cloud storage.
Share your record with others using email or an active link.

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How to fix motif in LOG

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Got questions?

Below are some common questions from our customers that may provide you with the answer you're looking for. If you can't find an answer to your question, please don't hesitate to reach out to us.

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What is max stored scores in FIMO?

The parameter --max-stored-scores sets the maximum number of motif occurrences that will be retained in memory. It defaults to 100,000.

What is motif enrichment analysis?

Motif Enrichment Analysis: find known DNA, RNA or protein motifs that are relatively enriched in the input sequences compared to shuffled version of those sequences or control sequences, or that are enriched in sequences with small values of scores that you can specify with your input sequences.

What is the difference between FIMO and mast?

FIMO and MAST have entirely different purposes. FIMO identifies statistically docHub matches to motifs in a collection of sequences. MAST identifies the sequences that have the best overall match to a collection of motifs.

What format does FIMO output?

FIMO outputs a GFF3 file (fimo. gff) that contains one line for each docHub match to a motif.

Why is my Motif breast pump not working?

0:00 1:00 Assembly. If the valves are not properly attached there will be a lack of suction. If the diaphragmMoreAssembly. If the valves are not properly attached there will be a lack of suction. If the diaphragm is not properly moving up and down then it may not be securely attached.

What is the Q value in FIMO?

The q-value is similar to a p-value but corrected for multiple testing. Like a p-value, a q-value of 0.01 or less is a reasonable threshold for significance. However, to compute q-values, FIMO has to hold all the matches in memory. When scanning a full genome this can easily require tens of GB of memory.

What is the FIMO method?

The name FIMO stands for Find Individual Motif Occurrences. The program searches a database of sequences for occurrences of known motifs, treating each motif independently. Motifs must be in MEME Motif Format. The web version of FIMO also allows you to type in motifs in additional formats.

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