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To clean up a corpus, various pre-processing functions can be applied. The "lower" function makes all characters lowercase, useful for term aggregation. The "remove punctuation" function removes punctuation, can be beneficial for social media but harmful for identifying emoticons. Removing numbers may be needed, but not for text mining quantities. "Strip whitespace" function removes extra tabs or lines, aiding in data organization. Understanding each function's purpose is crucial for effective text analysis.